RNA Recognition Motif

Preferred Label : RNA Recognition Motif;

NCIt synonyms : RBD; RRM; RNP-1 Signature; RNA Binding Domain; RNP Motif; Putative RNA-Binding Region; RNP Domain;

NCIt definition : RNA Binding Domains (RBD) mediate the interaction of RNAs with RNA-binding proteins. RBDs of about 90 amino acids consist of a four-stranded beta sheet adjacent to two alpha helixes. Within RBDs, conserved RNP-1 and RNP-2 motifs on the central beta sheets lie side by side; their side chains contact RNA.;

Details

Origin ID

C13720;

UMLS CUI

C1522002;

Automatic exact mappings (from CISMeF team)
- RNA Recognition Motif [MeSH concept]
- RNA Recognition Motif [MeSH Descriptor]
- RNA-Binding Motifs [MeSH Descriptor]
- receptor binding domain [COVID-19 Thesaurus concept]
Semantic type(s)
- Amino Acid, Peptide, or Protein [UMLS semantic type]
- Biologically Active Substance [UMLS semantic type]
UMLS correspondences (same concept)
- RNA Recognition Motif [MeSH Descriptor]
is_structural_domain_or_motif_of_gene_product
- 60 kDa SS-A/Ro Ribonucleoprotein [NCIt concept]
- APOBEC1 Complementation Factor [NCIt concept]
- Ataxin-1 [NCIt concept]
- CUGBP Elav-Like Family Member 2 [NCIt concept]
- Cold Shock Domain-Containing Protein E1 [NCIt concept]
- Cytoplasmic Polyadenylation Element-Binding Protein 3 [NCIt concept]
- DAZ-Associated Protein 1 [NCIt concept]
- Dead End Protein Homolog 1 [NCIt concept]
- Deleted In Azoospermia-Like [NCIt concept]
- Deleted in Azoospermia Protein 1 [NCIt concept]
- ELAV-Like Protein 1 [NCIt concept]
- Elongator Complex Protein 1 [NCIt concept]
- Epithelial Splicing Regulatory Protein 1 [NCIt concept]
- Eukaryotic Translation Initiation Factor 3 Subunit B [NCIt concept]
- Heterogeneous Nuclear Ribonucleoprotein A1 [NCIt concept]
- Heterogeneous Nuclear Ribonucleoprotein A2/B1 [NCIt concept]
- Heterogeneous Nuclear Ribonucleoprotein A3 [NCIt concept]
- Heterogeneous Nuclear Ribonucleoprotein D0 [NCIt concept]
- Heterogeneous Nuclear Ribonucleoprotein H [NCIt concept]
- Heterogeneous Nuclear Ribonucleoprotein H2 [NCIt concept]
- Heterogeneous Nuclear Ribonucleoprotein M [NCIt concept]
- Histone-Lysine N-Methyltransferase SETD1A [NCIt concept]
- Histone-Lysine N-Methyltransferase SETD1B [NCIt concept]
- La-Related Protein 4B [NCIt concept]
- Lupus La Protein [NCIt concept]
- Msx2-Interacting Protein [NCIt concept]
- Negative Elongation Factor E [NCIt concept]
- Non-POU Domain-Containing Octamer-Binding Protein [NCIt concept]
- Nuclear Pore Complex Protein Nup98 [NCIt concept]
- Nuclear Pore Complex Protein Nup98-Nup96 [NCIt concept]
- Nucleolin [NCIt concept]
- Nucleolysin TIA-1 Isoform p40 [NCIt concept]
- Peroxisome Proliferator-Activated Receptor Gamma Coactivator 1-Alpha [NCIt concept]
- Peroxisome Proliferator-Activated Receptor Gamma Coactivator 1-Alpha Isoform 4 [NCIt concept]
- Peroxisome Proliferator-Activated Receptor Gamma Coactivator 1-Beta [NCIt concept]
- Poly(A)-Specific Ribonuclease PARN [NCIt concept]
- Polyadenylate-Binding Protein 1 [NCIt concept]
- Polypyrimidine Tract-Binding Protein 2 [NCIt concept]
- Polypyrimidine Tract-Binding Protein 3 [NCIt concept]
- Proliferation-Associated Protein 2G4 [NCIt concept]
- Pumilio Homolog 2 [NCIt concept]
- RNA Binding Protein Fox-1 Homolog 1 [NCIt concept]
- RNA-Binding Motif, Single-Stranded-Interacting Protein 1 [NCIt concept]
- RNA-Binding Protein 10 [NCIt concept]
- RNA-Binding Protein 14 [NCIt concept]
- RNA-Binding Protein 15 [NCIt concept]
- RNA-Binding Protein 38 [NCIt concept]
- RNA-Binding Protein 4 [NCIt concept]
- RNA-Binding Protein 5 [NCIt concept]
- RNA-Binding Protein 6 [NCIt concept]
- RNA-Binding Protein 8A [NCIt concept]
- RNA-Binding Protein EWS [NCIt concept]
- RNA-Binding Protein With Multiple Splicing [NCIt concept]
- RRP12-Like Protein [NCIt concept]
- Ribonucleoprotein PTB-Binding 1 [NCIt concept]
- Ribonucleoprotein PTB-Binding 2 [NCIt concept]
- Scaffold Attachment Factor B1 [NCIt concept]
- Serine/Arginine-Rich Splicing Factor 1 [NCIt concept]
- Serine/Arginine-Rich Splicing Factor 2 [NCIt concept]
- Serine/Arginine-Rich Splicing Factor 3 [NCIt concept]
- Splicing Factor Proline-and Glutamine-Rich [NCIt concept]
- Splicing Factor U2AF 35 kDa Subunit [NCIt concept]
- Splicing Factor U2AF 65 kDa Subunit [NCIt concept]
- Synaptojanin-1 [NCIt concept]
- TATA-Binding Protein-Associated Factor 2N [NCIt concept]
- Trinucleotide Repeat-Containing Gene 6B Protein [NCIt concept]
- U2 Small Nuclear Ribonucleoprotein Auxiliary Factor 35 kDa Subunit-Related Protein 2 [NCIt concept]
- U3 Small Nucleolar Ribonucleoprotein Protein IMP3 [NCIt concept]
- U3 Small Nucleolar Ribonucleoprotein Protein MPP10 [NCIt concept]
- Zinc Finger Protein 638 [NCIt concept]

Keyword's position in hierarchy(ies) :

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