Hypoxia-Inducible Factor Pathway

Preferred Label : Hypoxia-Inducible Factor Pathway;

CISMeF synonym : HIF pathway;

NCIt related terms : Hypoxia-Inducible Factor in the Cardiovascular System;

Alternative definition : BIOCARTA: Hypoxia (or low O2 levels) affects various pathologies. First, tissue ischemia, a variation in O2 tension caused by hypoxia/reoxygenation, can lead to endothelial cell changes. For example, long periods of ischemia result in endothelial changes, such as vascular leakage, resulting in varicose veins. In more severe situations, ischemia can lead to myocardial or cerebral infarction and retinal vessel occlusion. Of interest, HIF-1 is stabilized prior to induction of vascular endothelial growth factor (VEGF) expression during acute ischemia in the human heart. Second, pulmonary hypertension associated with chronic respiratory disorders results from persistent vasoconstriction and vascular remodeling. Third, hypoxic gradients created in enlarging solid tumors trigger expression of genes containing hypoxia response elements (HREs) such as those involved in angiogenesis. This allows subsequent delivery of O2, nutrients, and further tumor growth. Vascular remodeling is an important component to tumorigenesis; without proper blood supply, delivery of oxygen may occur by diffusion, but becomes inefficient in tumors greater than 1 mm in diameter. Short-term hypoxia can also elevate platelet numbers, while prolonged exposure may cause some degree of thrombocytopenia in response to increased levels of erythropoietin (EPO). Another disorder involving inadequate responses to hypoxia is preeclampsia, a pathology of pregnancy thought to be caused by improper differentiation of placental trophoblast cells due to poorly controlled O2 tension or improper hypoxia-inducible factor (HIF)-mediated responses. The primary molecular mechanism of gene activation during hypoxia is through HIF-1. Several genes involved in cellular differentiation are directly or indirectly regulated by hypoxia. These include EPO, LDH-A, ET-1, transferrin, transferrin receptor, VEGF, Flk-1, Flt-1, platelet-derived growth factor-beta (PDGF-b), basic fibroblast growth factor (bFGF), and others genes affecting glycolysis. HIF-1 is a member of the basic helix-loop-helix (bHLH)-PAS family of transcription factors known to induce gene expression by binding to a 50-bp HRE containing a core 5'-ACGTG-3' sequence. bHLH-PAS proteins heterodimerize to form transcription complexes that regulate O2 homeostasis, circadian rhythms, neurogenesis, and toxin metabolism. Three bHLH-PAS proteins in vertebrates respond to hypoxia: HIF-1, EPAS (HIF-2), and HIF-3. These dimerize with ARNT (aryl hydrocarbon receptor nuclear translocator protein), ARNT-2, or ARNT-3. HIF-1 is ubiquitinated and subsequently degraded in less than 5 minutes under normoxic conditions. Although several candidate O2-sensing molecules have emerged in the literature, the molecular basis of how cells sense O2 levels is poorly characterized. pVHL, the protein product of a tumor-suppressor gene responsible for von Hippel Lindau disease, is implicated in this O2-sensing system by its association with HIF-1, targeting it for ubiquitin-mediated degradation. Similarly, F-box-containing proteins recognize substrates of the ubiquitin ligases, targeting them for phosphorylation-dependent ubiquitination and proteasomal degradation. In addition to F-boxes, most of these proteins also contain a WD40 or a leucine-rich repeat (LLR) domain that presumably functions as a Ser/Thr binding module. A second family of proteins assisting the ubiquitin ligases share a region designated SOCS-box (originally from the suppressor of cytokine signaling proteins SOCS). Under low O2 ( 5% O2) HIF-1 is stabilized leading to the formation of a functional transcription factor complex with ARNT. This complex is the master regulator of O2 homeostasis and induces a network of genes involved in angiogenesis, erythropoiesis, and glucose metabolism. (This definition may be outdated - see the DesignNote.);

NCIt note : The BIOCARTA Definition (ALT_DEFINITION) for this pathway concept was provided by BioCarta. This property was not created by, nor is it maintained by the NCI Thesaurus staff. Additionally, BioCarta is no longer updating its pathway data; thus, the BIOCARTA Definition might be outdated or inaccurate. Please see the Terms and Conditions for Use at http://www.biocarta.com/.;

Biocarta ID : h_hifPathway;

Details

Origin ID

C39105;

UMLS CUI

C1512574;

Semantic type(s)
- Organ or Tissue Function [UMLS semantic type]
has_gene_product_element
- Aryl Hydrocarbon Receptor Nuclear Translocator [NCIt concept]
- Aspartyl/Asparaginyl Beta-Hydroxylase [NCIt concept]
- Cyclic AMP-Responsive Element-Binding Protein 1 [NCIt concept]
- Endothelin-1 [NCIt concept]
- Erythropoietin [NCIt concept]
- Heat Shock Protein HSP 90-Alpha [NCIt concept]
- Histone Acetyltransferase p300 [NCIt concept]
- Hypoxia-Inducible Factor 1-Alpha [NCIt concept]
- L-Lactate Dehydrogenase A Chain [NCIt concept]
- L-Lactate Dehydrogenase B Chain [NCIt concept]
- Nitric Oxide Synthase, Endothelial [NCIt concept]
- Transcription Factor AP-1 [NCIt concept]
- Vascular Endothelial Growth Factor A [NCIt concept]
- Vascular Endothelial Growth Factor A 165 Isoform [NCIt concept]
- Von Hippel-Lindau Disease Tumor Suppressor [NCIt concept]
pathway_has_gene_element
- ARNT wt Allele [NCIt concept]
- ASPH wt Allele [NCIt concept]
- CREB1 wt Allele [NCIt concept]
- EDN1 wt Allele [NCIt concept]
- EP300 wt Allele [NCIt concept]
- EPO wt Allele [NCIt concept]
- HIF1A wt Allele [NCIt concept]
- HSP90AA1 wt Allele [NCIt concept]
- JUN wt Allele [NCIt concept]
- LDHA wt Allele [NCIt concept]
- LDHB wt Allele [NCIt concept]
- NOS3 wt Allele [NCIt concept]
- VEGFA wt Allele [NCIt concept]
- VHL wt Allele [NCIt concept]

Keyword's position in hierarchy(ies) :

You can consult :

recommendations
documents concerning education
documents for patients