RNA Splicing - CISMeF

Preferred Label : RNA Splicing;

NCIt synonyms : Splicing;

NCIt definition : Removal of introns from mRNA precursors and the reattachment or annealing of exons.;

Alternative definition : NCI-GLOSS: The process by which introns, the noncoding regions of genes, are excised out of the primary messenger RNA transcript, and the exons (i.e., coding regions) are joined together to generate mature messenger RNA. The latter serves as the template for synthesis of a specific protein.;

Codes from synonyms : CDR0000460220;

Details

Origin ID

C17106;

UMLS CUI

C0035687;

Automatic exact mappings (from CISMeF team)
- RNA splicing [EDAM topic]
- mRNA cis splicing, via spliceosome [GO term]
Currated CISMeF NLP mapping
- RNA splicing [MeSH concept]
- Ribonucleic acid splicing (finding) [SNOMED CT concept]
- rna splicing [MeSH Descriptor]
- rna splicing [SNOMED Notion]
False automatic mappings
- RNA splicing [GO term]
Semantic type(s)
- Genetic Function [UMLS semantic type]
UMLS correspondences (same concept)
- RNA splicing [GO term]
- RNA splicing [MeSH concept]
- Ribonucleic acid splicing (finding) [SNOMED CT concept]
- rna splicing [SNOMED Notion]
- rna splicing [MeSH Descriptor]
Validated automatic mappings to NTBT
- splicing [IUPAC Term]
biological_process_has_associated_location
- Gene Feature [NCIt concept]
biological_process_involves_gene_product
- ATP-Dependent RNA Helicase DDX24 [NCIt concept]
- CD2 Antigen Cytoplasmic Tail-Binding Protein 2 [NCIt concept]
- Complement Component 1 Q Subcomponent-Binding Protein, Mitochondrial [NCIt concept]
- Crooked Neck-Like Protein 1 [NCIt concept]
- Cyclin-Dependent Kinase 12 [NCIt concept]
- Epithelial Splicing Regulatory Protein 1 [NCIt concept]
- Fas-Activated Serine/Threonine Kinase [NCIt concept]
- Heterogeneous Nuclear Ribonucleoprotein D0 [NCIt concept]
- Nuclease-Sensitive Element-Binding Protein 1 [NCIt concept]
- Nucleolysin TIA-1 Isoform p40 [NCIt concept]
- PC4 and SFRS1-Interacting Protein Isoform 2 [NCIt concept]
- Poly(rC)-Binding Protein 1 [NCIt concept]
- Polyglutamine-Binding Protein 1 [NCIt concept]
- Polypyrimidine Tract-Binding Protein 2 [NCIt concept]
- Polypyrimidine Tract-Binding Protein 3 [NCIt concept]
- Polyribonucleotide 5'-Hydroxyl-Kinase Clp1 [NCIt concept]
- Pre-mRNA-Processing Factor 40 Homolog B [NCIt concept]
- Pre-mRNA-Splicing Factor ATP-Dependent RNA Helicase DHX15 [NCIt concept]
- Pre-mRNA-Splicing Factor SPF27 [NCIt concept]
- Probable ATP-Dependent RNA Helicase DDX20 [NCIt concept]
- Probable ATP-Dependent RNA Helicase DDX41 [NCIt concept]
- Probable ATP-Dependent RNA Helicase DDX5 [NCIt concept]
- Protein DEK [NCIt concept]
- Putative Pre-mRNA-Splicing Factor ATP-Dependent RNA Helicase DHX16 [NCIt concept]
- RNA Binding Protein Fox-1 Homolog 1 [NCIt concept]
- RNA-Binding Protein 15 [NCIt concept]
- RNA-Binding Protein 38 [NCIt concept]
- RNA-Binding Protein 5 [NCIt concept]
- RNA-Binding Protein 8A [NCIt concept]
- RNA-Binding Protein Nova-1 [NCIt concept]
- SNW Domain-Containing Protein 1 [NCIt concept]
- SRSF Protein Kinase 1 [NCIt concept]
- Serine/Arginine-Rich Splicing Factor 1 [NCIt concept]
- Serine/Arginine-Rich Splicing Factor 2 [NCIt concept]
- Serine/Arginine-Rich Splicing Factor 3 [NCIt concept]
- Serine/Threonine-Protein Kinase/Endoribonuclease IRE1 [NCIt concept]
- Small Nuclear RNA U1 [NCIt concept]
- Small Nuclear Ribonucleoprotein Sm D3 [NCIt concept]
- Small Nuclear Ribonucleoprotein-Associated Protein N [NCIt concept]
- Spliceosome RNA Helicase DDX39B [NCIt concept]
- Splicing Factor 3B Subunit 1 [NCIt concept]
- Splicing Factor 3B Subunit 3 [NCIt concept]
- Splicing Factor Proline-and Glutamine-Rich [NCIt concept]
- Splicing Factor U2AF 35 kDa Subunit [NCIt concept]
- Splicing Factor U2AF 65 kDa Subunit [NCIt concept]
- Splicing Regulator ARVCF [NCIt concept]
- Survival Motor Neuron Protein [NCIt concept]
- TAR DNA-Binding Protein 43 [NCIt concept]
- U11/U12 Small Nuclear Ribonucleoprotein 25 kDa Protein [NCIt concept]
- U2 Small Nuclear Ribonucleoprotein Auxiliary Factor 35 kDa Subunit-Related Protein 2 [NCIt concept]
- U3 Small Nucleolar Ribonucleoprotein Protein MPP10 [NCIt concept]
- U4/U6.U5 Tri-SnRNP-Associated Protein 1 [NCIt concept]
- YTH Domain-Containing Protein 1 [NCIt concept]
process_involves_gene
- ARVCF Gene [NCIt concept]
- ARVCF wt Allele [NCIt concept]
- C1QBP Gene [NCIt concept]
- C1QBP wt Allele [NCIt concept]
- CD2BP2 Gene [NCIt concept]
- CD2BP2 wt Allele [NCIt concept]
- CDK12 Gene [NCIt concept]
- CDK12 wt Allele [NCIt concept]
- CLP1 Gene [NCIt concept]
- CLP1 wt Allele [NCIt concept]
- CRNKL1 Gene [NCIt concept]
- CRNKL1 wt Allele [NCIt concept]
- DDX39B Gene [NCIt concept]
- DDX39B wt Allele [NCIt concept]
- DDX41 Gene [NCIt concept]
- DDX41 wt Allele [NCIt concept]
- DDX5 Gene [NCIt concept]
- DDX5 wt Allele [NCIt concept]
- DEK Gene [NCIt concept]
- DEK wt Allele [NCIt concept]
- DHX15 Gene [NCIt concept]
- DHX15 wt Allele [NCIt concept]
- DHX16 Gene [NCIt concept]
- DHX16 wt Allele [NCIt concept]
- ERN1 Gene [NCIt concept]
- ERN1 wt Allele [NCIt concept]
- ESRP1 Gene [NCIt concept]
- ESRP1 wt Allele [NCIt concept]
- HNRNPD Gene [NCIt concept]
- HNRNPD wt Allele [NCIt concept]
- MPHOSPH10 Gene [NCIt concept]
- MPHOSPH10 wt Allele [NCIt concept]
- NONO Gene [NCIt concept]
- NONO wt Allele [NCIt concept]
- NOVA1 Gene [NCIt concept]
- NOVA1 wt Allele [NCIt concept]
- PCBP1 Gene [NCIt concept]
- PCBP1 wt Allele [NCIt concept]
- PQBP1 Gene [NCIt concept]
- PQBP1 wt Allele [NCIt concept]
- PRPF40B Gene [NCIt concept]
- PRPF40B wt Allele [NCIt concept]
- PSIP1 Gene [NCIt concept]
- PSIP1 wt Allele [NCIt concept]
- PTBP2 Gene [NCIt concept]
- PTBP2 wt Allele [NCIt concept]
- PTBP3 Gene [NCIt concept]
- PTBP3 wt Allele [NCIt concept]
- RBFOX1 Gene [NCIt concept]
- RBFOX1 wt Allele [NCIt concept]
- RBM5 Gene [NCIt concept]
- RBM5 wt Allele [NCIt concept]
- RBM8A Gene [NCIt concept]
- RBM8A wt Allele [NCIt concept]
- SART1 Gene [NCIt concept]
- SART1 wt Allele [NCIt concept]
- SF3B1 Gene [NCIt concept]
- SF3B1 wt Allele [NCIt concept]
- SF3B3 Gene [NCIt concept]
- SF3B3 wt Allele [NCIt concept]
- SFPQ Gene [NCIt concept]
- SFPQ wt Allele [NCIt concept]
- SMN1 Gene [NCIt concept]
- SMN1 wt Allele [NCIt concept]
- SMN2 Gene [NCIt concept]
- SMN2 wt Allele [NCIt concept]
- SNRNP25 Gene [NCIt concept]
- SNRNP25 wt Allele [NCIt concept]
- SNRPD3 Gene [NCIt concept]
- SNRPD3 wt Allele [NCIt concept]
- SNRPN Gene [NCIt concept]
- SNRPN wt Allele [NCIt concept]
- SRPK1 Gene [NCIt concept]
- SRPK1 wt Allele [NCIt concept]
- SRSF1 Gene [NCIt concept]
- SRSF1 wt Allele [NCIt concept]
- SRSF2 Gene [NCIt concept]
- SRSF2 wt Allele [NCIt concept]
- SRSF3 Gene [NCIt concept]
- SRSF3 wt Allele [NCIt concept]
- Small Nuclear RNA U1 Gene [NCIt concept]
- TARDBP Gene [NCIt concept]
- TARDBP wt Allele [NCIt concept]
- TIA1 Gene [NCIt concept]
- TIA1 wt Allele [NCIt concept]
- U2AF1 Gene [NCIt concept]
- U2AF1 wt Allele [NCIt concept]
- U2AF2 Gene [NCIt concept]
- U2AF2 wt Allele [NCIt concept]
- YBX1 Gene [NCIt concept]
- YBX1 wt Allele [NCIt concept]
- YTHDC1 Gene [NCIt concept]
- YTHDC1 wt Allele [NCIt concept]
- ZRSR2 Gene [NCIt concept]
- ZRSR2 wt Allele [NCIt concept]

Keyword's position in hierarchy(ies) :

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