Sequence Alignment Map

Preferred Label : Sequence Alignment Map;

NCIt synonyms : SAM; Sequence Alignment/Map;

NCIt definition : A tab-delimited, text-based format for storing biological sequences aligned to a reference sequence. A SAM file includes an optional header section and an alignment section. Each alignment line has 11 mandatory fields for essential alignment information, such as mapping position, and a variable number of optional fields.;

NCI Metathesaurus CUI : CL554564;

Details

Origin ID

C153248;

UMLS CUI

C4724393;

Automatic exact mappings (from CISMeF team)
- S-Adenosylmethionine [MeSH Descriptor]
- SAM [EDAM format]
- Systolic anterior movement of mitral valve (disorder) [SNOMED CT concept]
- macrophage activation syndrome [MeSH Descriptor]
- meconium aspiration syndrome [MeSH Descriptor]
Semantic type(s)
- Qualitative Concept [UMLS semantic type]
concept_is_in_subset
- pFDA Bioinformatics/Genomics Terminology [NCIt concept]
- precisionFDA Terminology [NCIt concept]

Keyword's position in hierarchy(ies) :

Main resources

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