Chromatin Remodeling Factor

Preferred Label : Chromatin Remodeling Factor;

NCIt synonyms : Chromatin Remodeling Protein; Chromatin Remodeling Complex;

NCIt definition : The proteins or protein complexes that can either activate or silence gene transcription through their ability to modify the architecture of chromatin. These factors alter the accessibility of DNA to those factors that are required for gene transcription.;

Details

Origin ID

C18602;

UMLS CUI

C1333030;

Automatic exact mappings (from CISMeF team)
- SET nuclear proto-oncogene [ORDO Gene]
- SET nuclear proto-oncogene [HGNC gene]
Biochemical function of gene products
- AT-Rich Interactive Domain-Containing Protein 1B [NCIt concept]
- AT-Rich Interactive Domain-Containing Protein 2 [NCIt concept]
- AT-Rich Interactive Domain-Containing Protein 4B [NCIt concept]
- Ankyrin Repeat Domain-Containing Protein 11 [NCIt concept]
- Ataxin-7 [NCIt concept]
- Ataxin-7-Like Protein 3 [NCIt concept]
- BEN Domain-Containing Protein 3 [NCIt concept]
- BRCA1-A Complex Subunit RAP80 [NCIt concept]
- BRD4-Interacting Chromatin-Remodeling Complex-Associated Protein [NCIt concept]
- BRD4-Interacting Chromatin-Remodeling Complex-Associated Protein-Like [NCIt concept]
- BRISC and BRCA1-A Complex Member 1 [NCIt concept]
- BRISC and BRCA1-A Complex Member 2 [NCIt concept]
- Bromodomain Adjacent to Zinc Finger Domain Protein 1A [NCIt concept]
- Bromodomain-Containing Protein 9 [NCIt concept]
- Calcium-Responsive Transactivator [NCIt concept]
- Canonical BAF Complex [NCIt concept]
- Cat Eye Syndrome Critical Region Protein 2 [NCIt concept]
- Chromatin Assembly Factor 1 Subunit A [NCIt concept]
- Chromatin Assembly Factor I [NCIt concept]
- Chromatin Modification-Related Protein MEAF6 [NCIt concept]
- Chromobox Protein Homolog 1 [NCIt concept]
- Chromobox Protein Homolog 2 [NCIt concept]
- Chromobox Protein Homolog 3 [NCIt concept]
- Chromobox Protein Homolog 5 [NCIt concept]
- Chromodomain-Helicase-DNA-Binding Protein 1-Like [NCIt concept]
- Chromodomain-Helicase-DNA-Binding Protein 3 [NCIt concept]
- Chromodomain-Helicase-DNA-Binding Protein 4 [NCIt concept]
- Chromodomain-Helicase-DNA-Binding Protein 6 [NCIt concept]
- Chromodomain-Helicase-DNA-Binding Protein 8 [NCIt concept]
- Chromodomain-Helicase-DNA-Binding Protein 9 [NCIt concept]
- DDB1- and CUL4-Associated Factor 1 [NCIt concept]
- Deubiquitinase MYSM1 [NCIt concept]
- E-RC1 [NCIt concept]
- E1A-Binding Protein P400 [NCIt concept]
- E3 SUMO-Protein Ligase CBX4 [NCIt concept]
- E3 Ubiquitin-Protein Ligase UHRF1 [NCIt concept]
- Enhancer of Polycomb Homolog 1 [NCIt concept]
- FACT Complex [NCIt concept]
- FACT Complex Subunit SPT16 [NCIt concept]
- FACT Complex Subunit SSRP1 [NCIt concept]
- Helicase SRCAP [NCIt concept]
- Histone Acetyltransferase p300 [NCIt concept]
- Histone Deacetylase [NCIt concept]
- Histone Deacetylase 1 [NCIt concept]
- Histone Deacetylase 10 [NCIt concept]
- Histone Deacetylase 11 [NCIt concept]
- Histone Deacetylase 2 [NCIt concept]
- Histone Deacetylase 3 [NCIt concept]
- Histone Deacetylase 4 [NCIt concept]
- Histone Deacetylase 5 [NCIt concept]
- Histone Deacetylase 6 [NCIt concept]
- Histone Deacetylase 7 [NCIt concept]
- Histone Deacetylase 8 [NCIt concept]
- Histone Deacetylase 9 [NCIt concept]
- Histone-Arginine Methyltransferase CARM1 [NCIt concept]
- Histone-Binding Protein RBBP4 [NCIt concept]
- Histone-Binding Protein RBBP7 [NCIt concept]
- Histone-Lysine N-Methyltransferase EZH1 [NCIt concept]
- Histone-Lysine N-Methyltransferase EZH2 [NCIt concept]
- Histone-Lysine N-Methyltransferase KMT5B [NCIt concept]
- Histone-Lysine N-Methyltransferase KMT5C [NCIt concept]
- Histone-Lysine N-Methyltransferase NSD2 [NCIt concept]
- Histone-Lysine N-Methyltransferase NSD3 [NCIt concept]
- INO80 Complex [NCIt concept]
- ISWI Family Protein [NCIt concept]
- Inhibitor of Growth Protein 4 [NCIt concept]
- Lys-63-Specific Deubiquitinase BRCC36 [NCIt concept]
- Lysine-Specific Demethylase 2B [NCIt concept]
- Lysine-Specific Demethylase 3A [NCIt concept]
- Lysine-Specific Demethylase 3B [NCIt concept]
- Lysine-Specific Demethylase 4B [NCIt concept]
- Lysine-Specific Demethylase 4C [NCIt concept]
- Lysine-Specific Demethylase 5A [NCIt concept]
- Lysine-Specific Demethylase 5C [NCIt concept]
- Lysine-Specific Demethylase 6A [NCIt concept]
- Lysine-Specific Demethylase 6B [NCIt concept]
- Lysine-Specific Demethylase 7A [NCIt concept]
- Lysine-Specific Histone Demethylase 1A [NCIt concept]
- Methylcytosine Dioxygenase TET3 [NCIt concept]
- N-Lysine Methyltransferase KMT5A [NCIt concept]
- Neural Progenitor-Specific BAF Complex [NCIt concept]
- Neuron-Specific BAF Complex [NCIt concept]
- Non-Canonical BAF Complex [NCIt concept]
- Nucleosome-Remodeling Factor Subunit BPTF [NCIt concept]
- PBAF Complex [NCIt concept]
- Polycomb Complex Protein BMI-1 [NCIt concept]
- Polycomb Protein EED [NCIt concept]
- Polycomb Protein SUZ12 [NCIt concept]
- Polycomb-Group Protein [NCIt concept]
- Protein DEK [NCIt concept]
- Protein ENL [NCIt concept]
- Protein Jumonji [NCIt concept]
- Protein Polybromo-1 [NCIt concept]
- Protein-Arginine Deiminase Type-2 [NCIt concept]
- Protein-Arginine Deiminase Type-4 [NCIt concept]
- Putative Polycomb Group Protein ASXL1 [NCIt concept]
- Putative Polycomb Group Protein ASXL2 [NCIt concept]
- RING1 and YY1-Binding Protein [NCIt concept]
- RNA Polymerase-Associated Protein CTR9 Homolog [NCIt concept]
- SET and MYND Domain-Containing Protein 3 [NCIt concept]
- SWI/SNF Complex Subunit SMARCC1 [NCIt concept]
- SWI/SNF-Related Matrix-Associated Actin-Dependent Regulator of Chromatin Subfamily B Member 1 [NCIt concept]
- SWI/SNF-Related Matrix-Associated Actin-Dependent Regulator of Chromatin Subfamily D Member 1 [NCIt concept]
- SWI/SNF-Related Matrix-Associated Actin-Dependent Regulator of Chromatin Subfamily D Member 2 [NCIt concept]
- SWI/SNF-Related Matrix-Associated Actin-Dependent Regulator of Chromatin Subfamily D Member 3 [NCIt concept]
- SWI/SNF-Related Matrix-Associated Actin-Dependent Regulator of Chromatin Subfamily E Member 1 [NCIt concept]
- SWI2/SNF2 Family Protein [NCIt concept]
- Scaffold Attachment Factor B1 [NCIt concept]
- Testis-Specific Y-Encoded-Like Protein 2 [NCIt concept]
- Thymocyte Selection-Associated High Mobility Group Box Protein TOX [NCIt concept]
- Transcription Elongation Factor SPT5 [NCIt concept]
- Transcription Elongation Factor SPT6 [NCIt concept]
- Transcription Initiation Protein SPT3 Homolog [NCIt concept]
- Transcriptional Repressor CTCF [NCIt concept]
- Transcriptional Repressor CTCFL [NCIt concept]
- Transformation/Transcription Domain-Associated Protein [NCIt concept]
- WD Repeat-Containing Protein 5 [NCIt concept]
- WW Domain-Containing Adapter Protein With Coiled-Coil [NCIt concept]
- Zinc Finger MYM-Type Protein 3 [NCIt concept]
- Zinc Finger Protein AEBP2 [NCIt concept]
- hSWI/SNF Complex [NCIt concept]
Currated CISMeF NLP mapping
- obsolete chromatin remodeling complex [GO term]
Semantic type(s)
- Amino Acid, Peptide, or Protein [UMLS semantic type]
- Biologically Active Substance [UMLS semantic type]
gene_encodes_gene_product
- Regulatory Gene [NCIt concept]
gene_product_plays_role_in_biological_process
- Chromatin Remodeling [NCIt concept]
- DNA Topology Regulation [NCIt concept]
- Transcriptional Regulation [NCIt concept]

Keyword's position in hierarchy(ies) :

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